ATP concentration regulates enzyme kinetics
نویسندگان
چکیده
Adenosine 5’-triphosphate (ATP) is the nearly ubiquitous “energy currency” of living organisms, and thus is a crucial participant in the majority of enzymatic reactions. The standard models in enzyme kinetics generally ignore the temporal dynamics of ATP because it is assumed to be present in large excess. However, this assumption may not hold in many situations of cellular stress where ATP concentrations may be comparable to substrate levels. Here, we demonstrate the importance of ATP concentration on the dynamics of multi-enzyme reactions by explicit consideration of ATP as a secondary substrate for an enzyme. We apply our model to the mitogen-activated protein (MAP) kinase cascade, which is involved in the regulation of a vast range of cellular activities. We show that three fundamental features of this signaling network — (i) duration of response, (ii) signal amplification, and (iii) ultrasensitivity to stimulus concentration — are all dependent on ATP concentration. Our results indicate that the concentration of ATP regulates the response of the MAP kinase activation network, and potentially suggests another possible mechanism for disruption of the cascade in pathogenic states.
منابع مشابه
Rapid kinetics study of the nuclease activity of RecBCD enzyme from Escherichia coli
Title of dissertation: Rapid kinetics study of the nuclease activity of RecBCD enzyme from Escherichia coli Archana Ghatak, Doctor of Philosophy, 2006 Dissertation directed by: Prof. Douglas A. Julin Department of Chemistry and Biochemistry RecBCD enzyme from Escherichia coli is involved in homologous recombination and repair of bacterial DNA, and in defending the cell against foreign DNA. This...
متن کاملProbing the allosteric activation of pyruvate carboxylase using 2',3'-O-(2,4,6-trinitrophenyl) adenosine 5'-triphosphate as a fluorescent mimic of the allosteric activator acetyl CoA.
2',3'-O-(2,4,6-Trinitrophenyl) adenosine 5'-triphosphate (TNP-ATP) is a fluorescent analogue of ATP. MgTNP-ATP was found to be an allosteric activator of pyruvate carboxylase that exhibits competition with acetyl CoA in activating the enzyme. There is no evidence that MgTNP-ATP binds to the MgATP substrate binding site of the enzyme. At concentrations above saturating, MgATP activates bicarbona...
متن کاملMechanism of Stimulation and Inhibition of Tonoplast H-ATPase of Beta vulgaris by Chloride and Nitrate.
The H(+)-ATPase of tonoplast vesicles isolated from red beet (Beta vulgaris L.) storage tissue was studied with respect to the kinetic effects of Cl(-) and NO(3) (-). N-Ethylmaleimide (NEM) was employed as a probe to investigate substrate binding and gross conformational changes of the enzyme. Chloride decreased the K(m) of the enzyme for ATP but caused relatively little alteration of the V(max...
متن کاملAnalytical Solution of Steady State Substrate Concentration of an Immobilized Enzyme Kinetics by Laplace Transform Homotopy Perturbation Method
The nonlinear dynamical system modeling the immobilized enzyme kinetics with Michaelis-Menten mechanism for an irreversible reaction without external mass transfer resistance is considered. Laplace transform homotopy perturbation method is used to obtain the approximate solution of the governing nonlinear differential equation, which consists in determining the series solution convergent to the...
متن کاملExpression and Purification of the luciferase enzyme and in Vivo ATP Assay
Introduction: Gene expression and purification of luciferases from the firefly, Lampyris turkestanicus, and optimization of cellular ATP measurements were performed. Methods: cDNA encoding luciferases from Lampyris turkestanicus was transferred from pQE30 vector into pET28a expression vector and pLtu28 was built. Newly constructed vector was expressed in E. coli XL1 Blue and the recombinant l...
متن کاملذخیره در منابع من
با ذخیره ی این منبع در منابع من، دسترسی به آن را برای استفاده های بعدی آسان تر کنید
عنوان ژورنال:
دوره شماره
صفحات -
تاریخ انتشار 2014